Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm23200-201ENSMUST00000104379 132 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm15711-201ENSMUST00000118889 535 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm5419-201ENSMUST00000119301 527 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm17040-202ENSMUST00000170597 889 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Mir6927-201ENSMUST00000184494 71 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm18827-201ENSMUST00000188341 790 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trim3Q9R1R2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trim3Q9R1R2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm11511-201ENSMUST00000118146 540 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm12266-201ENSMUST00000120311 962 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm15610-201ENSMUST00000120584 195 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm25732-201ENSMUST00000175168 60 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm27552-201ENSMUST00000183351 62 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm27844-201ENSMUST00000183613 62 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm4607-201ENSMUST00000206649 577 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm17827-201ENSMUST00000211825 742 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.95□□□□□ -0.66
Trim3Q9R1R2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim3Q9R1R2 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.94□□□□□ -0.66
Trim3Q9R1R2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms