Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm12419-201ENSMUST00000116649 636 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm11244-201ENSMUST00000121243 237 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Mir5132-201ENSMUST00000175166 71 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm43378-201ENSMUST00000199336 582 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm6722-201ENSMUST00000221586 390 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk3aQ9JKX8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Btrc-209ENSMUST00000224478 2194 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm25148-201ENSMUST00000104611 123 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm11331-201ENSMUST00000119764 288 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm15432-201ENSMUST00000121106 195 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm15329-201ENSMUST00000121408 155 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm15549-201ENSMUST00000121595 622 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm4726-201ENSMUST00000135604 736 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm10051-201ENSMUST00000145209 414 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm6019-201ENSMUST00000148369 736 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Mir6546-201ENSMUST00000184460 62 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm5996-201ENSMUST00000211110 718 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk3aQ9JKX8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms