Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm44008-201ENSMUST00000204345 412 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube3bQ9ES34 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm14395-201ENSMUST00000120494 563 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm22138-201ENSMUST00000158748 128 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm3329-201ENSMUST00000159873 556 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm29107-201ENSMUST00000190910 347 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.82□□□□□ -0.2
Ube3bQ9ES34 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube3bQ9ES34 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Paupar-201ENSMUST00000194826 3482 ntBASIC13.81□□□□□ -0.2
Ube3bQ9ES34 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm8365-201ENSMUST00000197334 648 ntBASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.81□□□□□ -0.2
Ube3bQ9ES34 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.81□□□□□ -0.2
Ube3bQ9ES34 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms