Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm27390-201ENSMUST00000184516 176 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm45594-201ENSMUST00000211717 241 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim54Q9ERP3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim54Q9ERP3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim54Q9ERP3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trim54Q9ERP3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Gm15615-201ENSMUST00000118876 198 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim54Q9ERP3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms