Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Rrp8Q9DB85 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gm24791-201ENSMUST00000104284 131 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gm10263-201ENSMUST00000085163 300 ntBASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rrp8Q9DB85 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm12783-201ENSMUST00000121425 397 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm4862-201ENSMUST00000170405 438 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm43380-201ENSMUST00000200421 220 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm18514-201ENSMUST00000218980 436 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm8325-201ENSMUST00000099086 453 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms