Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm4984-201ENSMUST00000115987 360 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm13570-201ENSMUST00000140763 309 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm6114-201ENSMUST00000182472 968 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm27847-201ENSMUST00000183711 107 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm27375-201ENSMUST00000183799 107 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm7653-201ENSMUST00000214567 508 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Rims2-204ENSMUST00000226410 3685 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim42Q9D2H5 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm8738-201ENSMUST00000172606 329 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm9002-201ENSMUST00000178437 499 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm37201-201ENSMUST00000191845 523 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim42Q9D2H5 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms