Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Gm8731-201ENSMUST00000118088 412 ntBASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps28Q9D1C8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Mir1943-201ENSMUST00000158276 73 ntBASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm38151-201ENSMUST00000195085 289 ntBASIC11.9□□□□□ -0.5
Vps28Q9D1C8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gm45118-201ENSMUST00000208928 825 ntBASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vps28Q9D1C8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps28Q9D1C8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Vps28Q9D1C8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Vps28Q9D1C8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms