Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Gm11660-201ENSMUST00000120955 412 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Snf8Q9CZ28 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm43630-201ENSMUST00000201550 776 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm2553-201ENSMUST00000215986 605 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Snf8Q9CZ28 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm23270-201ENSMUST00000104055 131 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm26286-201ENSMUST00000104166 134 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm11500-201ENSMUST00000118237 601 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms