Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm13316-201ENSMUST00000140537 691 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm27514-201ENSMUST00000183692 110 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm37424-201ENSMUST00000191727 561 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim13Q9CYB0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Btrc-209ENSMUST00000224478 2194 ntBASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gm23931-201ENSMUST00000103842 109 ntBASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim13Q9CYB0 Gm5419-201ENSMUST00000119301 527 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms