Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Gm5733-201ENSMUST00000190232 939 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Gm45113-201ENSMUST00000207518 165 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpa3Q9CQ71 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa3Q9CQ71 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm4909-201ENSMUST00000118749 794 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm8199-201ENSMUST00000121323 823 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm6905-201ENSMUST00000205729 511 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpa3Q9CQ71 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Gm13916-201ENSMUST00000117368 628 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Rpa3Q9CQ71 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 189.2 ms