Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Gm43966-201ENSMUST00000203301 612 ntBASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm23596-201ENSMUST00000104304 132 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm12857-201ENSMUST00000117678 592 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm15711-201ENSMUST00000118889 535 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm12380-201ENSMUST00000119012 544 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm3332-201ENSMUST00000189337 928 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Erich3-203ENSMUST00000189969 3460 ntBASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim11Q99PQ2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Gm26083-201ENSMUST00000157904 193 ntBASIC13.21□□□□□ -0.29
Trim11Q99PQ2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.21□□□□□ -0.29
Trim11Q99PQ2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.21□□□□□ -0.29
Trim11Q99PQ2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim11Q99PQ2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.21□□□□□ -0.3
Trim11Q99PQ2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim11Q99PQ2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.2□□□□□ -0.3
Trim11Q99PQ2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms