Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm16480-201ENSMUST00000120439 832 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm44420-201ENSMUST00000203669 490 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm7815-201ENSMUST00000196104 832 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm9619-201ENSMUST00000211587 762 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm8730-201ENSMUST00000076373 954 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdh23Q99PF4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm16165-201ENSMUST00000160140 795 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm44908-201ENSMUST00000208610 266 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh23Q99PF4 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms