Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chmp1b1Q99LU0 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm4607-201ENSMUST00000206649 577 ntBASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm17827-201ENSMUST00000211825 742 ntBASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 AC121960.1-201ENSMUST00000227982 564 ntBASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp1b1Q99LU0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm22133-201ENSMUST00000102082 109 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm14277-201ENSMUST00000121195 360 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm9136-201ENSMUST00000193368 454 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm18893-201ENSMUST00000198416 943 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm19287-201ENSMUST00000203190 358 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm5363-201ENSMUST00000211927 938 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms