Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smarcd2Q99JR8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm8451-201ENSMUST00000170338 447 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Mt1-202ENSMUST00000211807 1085 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm7536-201ENSMUST00000077389 444 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Gm5453-201ENSMUST00000080866 447 ntBASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smarcd2Q99JR8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Smarcd2Q99JR8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm8111-201ENSMUST00000117659 987 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm15528-201ENSMUST00000117821 864 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm8302-201ENSMUST00000119217 852 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm15374-201ENSMUST00000119313 844 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm17192-201ENSMUST00000169031 511 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm20392-201ENSMUST00000173047 701 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gm26989-201ENSMUST00000182608 749 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd2Q99JR8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms