Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdha3Q91Y16 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm7851-201ENSMUST00000117574 323 ntBASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm9062-201ENSMUST00000117712 727 ntBASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm38117-201ENSMUST00000194653 939 ntBASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdha3Q91Y16 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm13263-201ENSMUST00000121271 838 ntBASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Spcs1-203ENSMUST00000226374 592 ntBASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdha3Q91Y16 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdha3Q91Y16 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdha3Q91Y16 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdha3Q91Y16 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 130.8 ms