Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm27552-201ENSMUST00000183351 62 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm27844-201ENSMUST00000183613 62 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm6108-201ENSMUST00000208365 367 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Erich3-203ENSMUST00000189969 3460 ntBASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb1Q91Y08 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm13916-201ENSMUST00000117368 628 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm14028-201ENSMUST00000117434 479 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm13461-201ENSMUST00000120980 662 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm8199-201ENSMUST00000121323 823 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Mir7070-201ENSMUST00000183657 86 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 AU022133-201ENSMUST00000200601 873 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb1Q91Y08 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms