Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Gm4604-201ENSMUST00000025040 390 ntBASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp7Q8R1T1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm8111-201ENSMUST00000117659 987 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm13351-201ENSMUST00000118087 414 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm25554-201ENSMUST00000158075 113 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm8197-202ENSMUST00000193422 934 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm6722-201ENSMUST00000221586 390 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp7Q8R1T1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Gm7082-201ENSMUST00000209880 969 ntBASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp7Q8R1T1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms