Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm20568-201ENSMUST00000197129 208 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm6518-201ENSMUST00000208450 342 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Id2-203ENSMUST00000222667 958 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm26782-203ENSMUST00000227103 751 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm25580-201ENSMUST00000083409 327 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Snord23-201ENSMUST00000116828 109 ntBASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Gm5529-201ENSMUST00000165691 891 ntBASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Gm10581-201ENSMUST00000097986 231 ntBASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx54Q8K4L0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm6755-201ENSMUST00000100598 864 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm6740-201ENSMUST00000100617 864 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm23604-201ENSMUST00000104311 132 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm8302-201ENSMUST00000119217 852 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm7572-201ENSMUST00000182616 766 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm17936-201ENSMUST00000199413 988 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 AC103672.1-201ENSMUST00000227502 365 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Paupar-201ENSMUST00000194826 3482 ntBASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx54Q8K4L0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms