Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm7857-201ENSMUST00000117957 358 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm23085-201ENSMUST00000157849 293 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm16505-201ENSMUST00000179981 232 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm5982-201ENSMUST00000196234 512 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm5714-201ENSMUST00000197343 566 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 AU022133-201ENSMUST00000200601 873 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Gm19208-201ENSMUST00000213861 912 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Erich3-203ENSMUST00000189969 3460 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.94□□□□□ -0.66
Clrn1Q8K445 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clrn1Q8K445 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm24891-201ENSMUST00000104391 136 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm14058-201ENSMUST00000116082 735 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms