Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm28071-201ENSMUST00000190355 478 ntBASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Gm45433-201ENSMUST00000209386 247 ntBASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cchcr1Q8K2I2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cchcr1Q8K2I2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cchcr1Q8K2I2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.69□□□□□ -0.22
Cchcr1Q8K2I2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cchcr1Q8K2I2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms