Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
ShfQ8CG80 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm44008-201ENSMUST00000204345 412 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm6334-201ENSMUST00000207083 228 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.33□□□□□ -0.76
ShfQ8CG80 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm25857-201ENSMUST00000082788 129 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.33□□□□□ -0.76
ShfQ8CG80 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.33□□□□□ -0.76
ShfQ8CG80 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
ShfQ8CG80 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 AA914427-201ENSMUST00000193194 1166 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm13097-201ENSMUST00000210722 397 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Cts7-204ENSMUST00000225321 1257 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gm7399-201ENSMUST00000032395 858 ntBASIC10.32□□□□□ -0.76
ShfQ8CG80 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
ShfQ8CG80 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
ShfQ8CG80 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms