Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm11222-201ENSMUST00000119005 738 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr284-202ENSMUST00000206647 966 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.19□□□□□ -0.46
Ccdc28aQ8CEI3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm23270-201ENSMUST00000104055 131 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm3329-201ENSMUST00000159873 556 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms