Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gzmn-202ENSMUST00000225535 989 ntBASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm2383-201ENSMUST00000181461 807 ntBASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc87Q8CDL9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm14130-201ENSMUST00000118417 987 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm26361-201ENSMUST00000158868 186 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm5070-201ENSMUST00000177599 862 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms