Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gm5870-201ENSMUST00000196461 282 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ptcd1Q8C2E4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.33□□□□□ -0.11
Ptcd1Q8C2E4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm11560-201ENSMUST00000117567 948 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm24248-201ENSMUST00000157321 322 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm22379-201ENSMUST00000157480 131 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm17931-201ENSMUST00000208132 634 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm6390-201ENSMUST00000215034 589 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Gm18968-201ENSMUST00000221319 862 ntBASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ptcd1Q8C2E4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ptcd1Q8C2E4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms