Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cpsf4Q8BQZ5 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm15515-201ENSMUST00000117827 822 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm14441-201ENSMUST00000121960 540 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm17040-202ENSMUST00000170597 889 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 AU022133-201ENSMUST00000200601 873 ntBASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.25□□□□□ -0.61
Cpsf4Q8BQZ5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm11509-201ENSMUST00000117358 325 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm19208-201ENSMUST00000213861 912 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms