Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm8152-201ENSMUST00000120842 637 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm4917-201ENSMUST00000121452 650 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm26313-201ENSMUST00000157770 308 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm18014-201ENSMUST00000183369 817 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm2345-201ENSMUST00000193451 589 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col16a1Q8BLX7 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Gm18123-201ENSMUST00000210874 822 ntBASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col16a1Q8BLX7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm23595-201ENSMUST00000104306 130 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm23604-201ENSMUST00000104311 132 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm19918-201ENSMUST00000194858 400 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm43564-201ENSMUST00000196185 211 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Gm7904-201ENSMUST00000217049 465 ntBASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col16a1Q8BLX7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col16a1Q8BLX7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col16a1Q8BLX7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms