Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Ighv13-1-201ENSMUST00000103480 294 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 Gm23745-201ENSMUST00000104230 125 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Gm11993-201ENSMUST00000121861 820 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Gm19918-201ENSMUST00000194858 400 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 AC152169.1-201ENSMUST00000223901 701 ntBASIC16.23■□□□□ 0.19
Usp54Q8BL06 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp54Q8BL06 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm8384-201ENSMUST00000190905 704 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm6677-201ENSMUST00000195100 441 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Prss23os-202ENSMUST00000179361 1362 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm5739-201ENSMUST00000208601 1703 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp54Q8BL06 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.22■□□□□ 0.19
Usp54Q8BL06 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp54Q8BL06 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Gm37207-201ENSMUST00000194284 296 ntBASIC16.21■□□□□ 0.19
Usp54Q8BL06 Gm37723-201ENSMUST00000194480 565 ntBASIC16.21■□□□□ 0.19
Usp54Q8BL06 Gm38344-201ENSMUST00000195306 1353 ntBASIC16.21■□□□□ 0.19
Usp54Q8BL06 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp54Q8BL06 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.21■□□□□ 0.19
Usp54Q8BL06 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Usp54Q8BL06 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Usp54Q8BL06 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Gm6352-201ENSMUST00000203583 1134 ntBASIC16.21■□□□□ 0.18
Usp54Q8BL06 Gm7880-201ENSMUST00000203748 871 ntBASIC16.21■□□□□ 0.18
Usp54Q8BL06 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Gm42815-201ENSMUST00000198787 1470 ntBASIC16.21■□□□□ 0.18
Usp54Q8BL06 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp54Q8BL06 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp54Q8BL06 AC155245.1-201ENSMUST00000222266 1804 ntBASIC16.2■□□□□ 0.18
Usp54Q8BL06 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Gm44913-201ENSMUST00000208060 2990 ntBASIC16.2■□□□□ 0.18
Usp54Q8BL06 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp54Q8BL06 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp54Q8BL06 Gm24279-201ENSMUST00000104236 131 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms