Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm19918-201ENSMUST00000194858 400 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm12028-201ENSMUST00000118065 436 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 AC129017.2-201ENSMUST00000226118 1284 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Mir7051-201ENSMUST00000184167 73 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm9102-201ENSMUST00000219250 465 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm38348-201ENSMUST00000191718 2273 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 AC133496.1-201ENSMUST00000223891 743 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Gm23694-201ENSMUST00000179335 110 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smg1Q8BKX6 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm12435-201ENSMUST00000118949 1016 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm18504-201ENSMUST00000220917 929 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm24466-201ENSMUST00000179978 109 ntBASIC9.5□□□□□ -0.89
Smg1Q8BKX6 Gm42687-201ENSMUST00000199075 164 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms