Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.4□□□□□ -0.42
Smarcal1Q8BJL0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcal1Q8BJL0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smarcal1Q8BJL0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm18561-201ENSMUST00000206027 804 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm5996-201ENSMUST00000211110 718 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm18065-201ENSMUST00000221395 526 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcal1Q8BJL0 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm25053-201ENSMUST00000103982 133 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm25922-201ENSMUST00000104281 130 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm13422-201ENSMUST00000118834 504 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm25554-201ENSMUST00000158075 113 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm24679-201ENSMUST00000158762 111 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm37284-201ENSMUST00000193607 539 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm43163-201ENSMUST00000196571 442 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm25053-202ENSMUST00000199731 132 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcal1Q8BJL0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 209.9 ms