Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank2Q80Z38 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shank2Q80Z38 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank2Q80Z38 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.77□□□□□ -0.05
Shank2Q80Z38 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.77□□□□□ -0.05
Shank2Q80Z38 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm38314-201ENSMUST00000195709 625 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm12345-201ENSMUST00000119288 898 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm8659-201ENSMUST00000120024 1084 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm12745-201ENSMUST00000121767 214 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Mir1941-201ENSMUST00000157834 83 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm24312-201ENSMUST00000178677 119 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm2474-201ENSMUST00000195162 559 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Gm44605-201ENSMUST00000206892 949 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.76□□□□□ -0.05
Shank2Q80Z38 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank2Q80Z38 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Defa-ps17-201ENSMUST00000121849 171 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm19246-201ENSMUST00000173599 255 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm5808-201ENSMUST00000178090 357 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm38233-201ENSMUST00000194259 807 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank2Q80Z38 Gm10581-201ENSMUST00000097986 231 ntBASIC14.75□□□□□ -0.05
Shank2Q80Z38 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms