Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm10807-201ENSMUST00000177134 795 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm23771-201ENSMUST00000178702 110 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh19Q80TF3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm27910-201ENSMUST00000185004 107 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm3551-201ENSMUST00000190750 664 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm5982-201ENSMUST00000196234 512 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm4978-201ENSMUST00000071565 801 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh19Q80TF3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm22711-201ENSMUST00000116890 133 ntBASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm11700-201ENSMUST00000119409 403 ntBASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdh19Q80TF3 Gm44980-201ENSMUST00000205826 314 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms