Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm11500-201ENSMUST00000118237 601 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm3329-201ENSMUST00000159873 556 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm5370-201ENSMUST00000187187 574 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm7046-201ENSMUST00000221351 977 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scaf4Q6PFF0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm28937-201ENSMUST00000185413 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm29400-201ENSMUST00000187208 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm28662-201ENSMUST00000188446 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm28251-201ENSMUST00000188835 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm37318-201ENSMUST00000194325 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm38017-201ENSMUST00000194768 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm37287-201ENSMUST00000195449 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm37793-201ENSMUST00000195548 695 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms