Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.34□□□□□ -0.43
CtifQ6PEE2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Gm45331-201ENSMUST00000209868 554 ntBASIC12.34□□□□□ -0.43
CtifQ6PEE2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.34□□□□□ -0.43
CtifQ6PEE2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CtifQ6PEE2 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.33□□□□□ -0.43
CtifQ6PEE2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CtifQ6PEE2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.33□□□□□ -0.44
CtifQ6PEE2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CtifQ6PEE2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm44405-201ENSMUST00000198952 126 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms