Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm8566-201ENSMUST00000120174 465 ntBASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm5733-201ENSMUST00000190232 939 ntBASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm7940-201ENSMUST00000218195 769 ntBASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.54□□□□□ -0.24
Smarcc2Q6PDG5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm7851-201ENSMUST00000117574 323 ntBASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm23699-201ENSMUST00000158835 135 ntBASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm20426-201ENSMUST00000173657 440 ntBASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc2Q6PDG5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc2Q6PDG5 Gm11941-201ENSMUST00000119904 610 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm37246-201ENSMUST00000192665 835 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm1821-202ENSMUST00000227415 750 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc2Q6PDG5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc2Q6PDG5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms