Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm28937-201ENSMUST00000185413 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm29400-201ENSMUST00000187208 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm28662-201ENSMUST00000188446 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm28251-201ENSMUST00000188835 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm37318-201ENSMUST00000194325 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm38017-201ENSMUST00000194768 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm37287-201ENSMUST00000195449 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm37793-201ENSMUST00000195548 695 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm18065-201ENSMUST00000221395 526 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt39Q6IFX4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Rprl1-202ENSMUST00000198476 238 ntBASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.79□□□□□ -0.36
Krt39Q6IFX4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Krt39Q6IFX4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms