Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm10233-201ENSMUST00000089275 628 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Scn9aQ62205 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.44□□□□□ -0.26
Scn9aQ62205 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.44□□□□□ -0.26
Scn9aQ62205 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scn9aQ62205 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.43□□□□□ -0.26
Scn9aQ62205 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm26119-201ENSMUST00000175601 104 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm7572-201ENSMUST00000182616 766 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm38007-201ENSMUST00000192187 313 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm37723-201ENSMUST00000194480 565 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm9353-201ENSMUST00000200472 604 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm44605-201ENSMUST00000206892 949 ntBASIC13.43□□□□□ -0.26
Scn9aQ62205 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Scn9aQ62205 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Scn9aQ62205 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn9aQ62205 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.42□□□□□ -0.26
Scn9aQ62205 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.42□□□□□ -0.26
Scn9aQ62205 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.42□□□□□ -0.26
Scn9aQ62205 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Scn9aQ62205 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn9aQ62205 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.41□□□□□ -0.26
Scn9aQ62205 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.41□□□□□ -0.26
Scn9aQ62205 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms