Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox17Q61473 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.84□□□□□ -0.67
Sox17Q61473 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox17Q61473 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox17Q61473 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.83□□□□□ -0.67
Sox17Q61473 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sox17Q61473 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sox17Q61473 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox17Q61473 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Gm25214-201ENSMUST00000104573 129 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox17Q61473 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox17Q61473 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.83□□□□□ -0.68
Sox17Q61473 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox17Q61473 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox17Q61473 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox17Q61473 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Sox17Q61473 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm11531-201ENSMUST00000117614 555 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm43118-201ENSMUST00000199149 775 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms