Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.69□□□□□ -0.54
Six4Q61321 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.69□□□□□ -0.54
Six4Q61321 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six4Q61321 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Six4Q61321 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.68□□□□□ -0.54
Six4Q61321 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Six4Q61321 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Six4Q61321 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Gm3329-201ENSMUST00000159873 556 ntBASIC11.68□□□□□ -0.54
Six4Q61321 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.68□□□□□ -0.54
Six4Q61321 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.68□□□□□ -0.54
Six4Q61321 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.68□□□□□ -0.54
Six4Q61321 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Six4Q61321 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Six4Q61321 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.68□□□□□ -0.54
Six4Q61321 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Six4Q61321 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Six4Q61321 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Six4Q61321 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Gm16166-201ENSMUST00000118291 787 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Gm15573-201ENSMUST00000119487 540 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Gm11836-201ENSMUST00000121022 441 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Gm15432-201ENSMUST00000121106 195 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Six4Q61321 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.67□□□□□ -0.54
Six4Q61321 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.67□□□□□ -0.54
Six4Q61321 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.67□□□□□ -0.54
Six4Q61321 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.67□□□□□ -0.54
Six4Q61321 Olfr584-201ENSMUST00000098210 964 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Six4Q61321 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.67□□□□□ -0.54
Six4Q61321 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Six4Q61321 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.67□□□□□ -0.54
Six4Q61321 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.67□□□□□ -0.54
Six4Q61321 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six4Q61321 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six4Q61321 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Six4Q61321 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Six4Q61321 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms