Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm16071-201ENSMUST00000119589 793 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm15329-201ENSMUST00000121408 155 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm15549-201ENSMUST00000121595 622 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm17826-201ENSMUST00000189720 798 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm37299-201ENSMUST00000193951 826 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm5051-201ENSMUST00000204085 485 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps54Q5SPW0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Vps54Q5SPW0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Vps54Q5SPW0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm9089-201ENSMUST00000122027 526 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm37458-201ENSMUST00000194055 410 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm43852-201ENSMUST00000202098 917 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm8285-201ENSMUST00000208293 759 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps54Q5SPW0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps54Q5SPW0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms