Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vps13aQ5H8C4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.15□□□□□ -0.63
Vps13aQ5H8C4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm6378-201ENSMUST00000084199 444 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm26379-201ENSMUST00000178125 138 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm18042-201ENSMUST00000219887 790 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm14997-201ENSMUST00000119232 636 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm37723-201ENSMUST00000194480 565 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gm22341-201ENSMUST00000083775 129 ntBASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vps13aQ5H8C4 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.13□□□□□ -0.63
Vps13aQ5H8C4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms