Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Zfp560Q3URI6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Gm38151-201ENSMUST00000195085 289 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Gm1821-202ENSMUST00000227415 750 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Zfp560Q3URI6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm13809-201ENSMUST00000117921 597 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm37246-201ENSMUST00000192665 835 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Gm18065-201ENSMUST00000221395 526 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Zfp560Q3URI6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Zfp560Q3URI6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Zfp560Q3URI6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Zfp560Q3URI6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Zfp560Q3URI6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms