Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upf3aQ3ULJ3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm12783-201ENSMUST00000121425 397 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm37284-201ENSMUST00000193607 539 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gm7082-201ENSMUST00000209880 969 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upf3aQ3ULJ3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.21□□□□□ -0.46
Upf3aQ3ULJ3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm15528-201ENSMUST00000117821 864 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm23694-201ENSMUST00000179335 110 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm28833-201ENSMUST00000189671 559 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Upf3aQ3ULJ3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms