Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cul4aQ3TCH7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gm24255-201ENSMUST00000104481 128 ntBASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cul4aQ3TCH7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm12463-201ENSMUST00000118271 849 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm15276-201ENSMUST00000145953 498 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm43184-201ENSMUST00000197247 542 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 AY036118-201ENSMUST00000200021 923 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cul4aQ3TCH7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Cul4aQ3TCH7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cul4aQ3TCH7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cul4aQ3TCH7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms