Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm9630-201ENSMUST00000178304 885 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm6108-201ENSMUST00000208365 367 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf1Q07802 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm19009-201ENSMUST00000223072 823 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm25007-201ENSMUST00000083808 133 ntBASIC11.81□□□□□ -0.52
Ebf1Q07802 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.81□□□□□ -0.52
Ebf1Q07802 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ebf1Q07802 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.81□□□□□ -0.52
Ebf1Q07802 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm15610-201ENSMUST00000120584 195 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm18367-201ENSMUST00000176139 600 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm12407-201ENSMUST00000180219 324 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm27390-201ENSMUST00000184516 176 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.8□□□□□ -0.52
Ebf1Q07802 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm44158-201ENSMUST00000203881 505 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ebf1Q07802 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.8□□□□□ -0.52
Ebf1Q07802 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ebf1Q07802 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Ebf1Q07802 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm25076-201ENSMUST00000104098 132 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm13937-201ENSMUST00000121000 988 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm12628-201ENSMUST00000122193 382 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm38117-201ENSMUST00000194653 939 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.79□□□□□ -0.52
Ebf1Q07802 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ebf1Q07802 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Ebf1Q07802 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms