Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm25766-201ENSMUST00000104101 131 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm4294-201ENSMUST00000105169 614 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm15528-201ENSMUST00000117821 864 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm11500-201ENSMUST00000118237 601 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm12516-201ENSMUST00000120819 385 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm12030-201ENSMUST00000121917 223 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a2Q07643 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.55□□□□□ -0.4
Col9a2Q07643 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a2Q07643 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm9358-201ENSMUST00000183067 927 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm8197-202ENSMUST00000193422 934 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm3793-201ENSMUST00000204973 672 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Col9a2Q07643 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm3619-201ENSMUST00000219947 775 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm16380-201ENSMUST00000077997 478 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.54□□□□□ -0.4
Col9a2Q07643 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a2Q07643 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a2Q07643 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a2Q07643 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a2Q07643 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm12218-201ENSMUST00000117666 399 ntBASIC12.53□□□□□ -0.4
Col9a2Q07643 Gm13422-201ENSMUST00000118834 504 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms