Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm22711-201ENSMUST00000116890 133 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm12029-201ENSMUST00000120073 832 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.2□□□□□ -0.46
Cntn3Q07409 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm38151-201ENSMUST00000195085 289 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm8285-201ENSMUST00000208293 759 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm6108-201ENSMUST00000208365 367 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.2□□□□□ -0.46
Cntn3Q07409 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.2□□□□□ -0.46
Cntn3Q07409 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cntn3Q07409 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm8737-201ENSMUST00000122208 642 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn3Q07409 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm24844-201ENSMUST00000158679 127 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm3150-201ENSMUST00000166418 204 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm23045-201ENSMUST00000175041 96 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm12407-201ENSMUST00000180219 324 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.19□□□□□ -0.46
Cntn3Q07409 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.19□□□□□ -0.46
Cntn3Q07409 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cntn3Q07409 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cntn3Q07409 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms