Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a1Q05722 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm15703-201ENSMUST00000120250 880 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Mir1905-201ENSMUST00000122779 82 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm17043-201ENSMUST00000164621 1283 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm17782-201ENSMUST00000174345 880 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm20281-201ENSMUST00000188225 267 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm37981-201ENSMUST00000194280 535 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm9487-201ENSMUST00000216600 472 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 AC069561.2-201ENSMUST00000217596 420 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col9a1Q05722 CT009733.1-203ENSMUST00000224033 451 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.8□□□□□ -0.52
Col9a1Q05722 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Col9a1Q05722 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a1Q05722 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm7416-201ENSMUST00000117448 1487 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm11511-201ENSMUST00000118146 540 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm12583-201ENSMUST00000120677 853 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm6542-201ENSMUST00000153606 772 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm10012-202ENSMUST00000170379 372 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 Gm29354-201ENSMUST00000187613 696 ntBASIC11.79□□□□□ -0.52
Col9a1Q05722 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a1Q05722 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms