Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm18561-201ENSMUST00000206027 804 ntBASIC13.15□□□□□ -0.3
GabpaQ00422 Gm5468-202ENSMUST00000227851 682 ntBASIC13.15□□□□□ -0.3
GabpaQ00422 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GabpaQ00422 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.15□□□□□ -0.3
GabpaQ00422 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.15□□□□□ -0.3
GabpaQ00422 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GabpaQ00422 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.15□□□□□ -0.3
GabpaQ00422 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GabpaQ00422 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.15□□□□□ -0.3
GabpaQ00422 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
GabpaQ00422 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GabpaQ00422 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GabpaQ00422 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
GabpaQ00422 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.14□□□□□ -0.31
GabpaQ00422 Gm25554-201ENSMUST00000158075 113 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 Gm21778-201ENSMUST00000178779 471 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.14□□□□□ -0.31
GabpaQ00422 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GabpaQ00422 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GabpaQ00422 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GabpaQ00422 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
GabpaQ00422 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GabpaQ00422 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GabpaQ00422 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm25148-201ENSMUST00000104611 123 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm35960-201ENSMUST00000202712 767 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gm39288-201ENSMUST00000210554 446 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm9139-201ENSMUST00000218817 700 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.13□□□□□ -0.31
GabpaQ00422 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
GabpaQ00422 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm25517-201ENSMUST00000083865 134 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.13□□□□□ -0.31
GabpaQ00422 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
GabpaQ00422 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
GabpaQ00422 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GabpaQ00422 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms