Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim43bP86448 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.97□□□□□ -0.49
Trim43bP86448 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim43bP86448 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Gm2260-201ENSMUST00000184965 657 ntBASIC11.97□□□□□ -0.49
Trim43bP86448 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim43bP86448 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim43bP86448 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim43bP86448 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim43bP86448 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trim43bP86448 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim43bP86448 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Gm4909-201ENSMUST00000118749 794 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim43bP86448 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Gm26461-201ENSMUST00000175064 290 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Gm5706-201ENSMUST00000181525 993 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.96□□□□□ -0.49
Trim43bP86448 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Gm9996-201ENSMUST00000070359 913 ntBASIC11.96□□□□□ -0.49
Trim43bP86448 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim43bP86448 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trim43bP86448 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.96□□□□□ -0.5
Trim43bP86448 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trim43bP86448 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.96□□□□□ -0.5
Trim43bP86448 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Trim43bP86448 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Trim43bP86448 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trim43bP86448 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim43bP86448 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms