Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.81□□□□□ -0.36
Hmgb1P63158 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm17827-201ENSMUST00000211825 742 ntBASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.81□□□□□ -0.36
Hmgb1P63158 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hmgb1P63158 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgb1P63158 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.81□□□□□ -0.36
Hmgb1P63158 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm26670-201ENSMUST00000180429 3287 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 AC154352.1-201ENSMUST00000221477 2365 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm5616-201ENSMUST00000165252 384 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm8741-201ENSMUST00000174736 384 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Mir8093-201ENSMUST00000185043 137 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm43184-201ENSMUST00000197247 542 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 AY036118-201ENSMUST00000200021 923 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm10254-201ENSMUST00000052888 867 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgb1P63158 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.8□□□□□ -0.36
Hmgb1P63158 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgb1P63158 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm11500-201ENSMUST00000118237 601 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm26047-201ENSMUST00000157308 113 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm27627-201ENSMUST00000183644 150 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm38117-201ENSMUST00000194653 939 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm5982-201ENSMUST00000196234 512 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm26047-202ENSMUST00000198840 115 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm43758-201ENSMUST00000199500 367 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Gm43966-201ENSMUST00000203301 612 ntBASIC12.79□□□□□ -0.36
Hmgb1P63158 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms